Unlockable - Save Icons | |
| Protoman's Icon | Beat Neubla Gray. |
| StandComplete | Collect All 180 Standard Chips |
| MegaComplete | Collect All 60 Mega Chips |
| GigiComplete | Collect All 6 Giga Chips |
| DarkComplete | Collect All 12 Dark Chips |
| P.A.Complete | Use All 30 Program Advances |
| Forte's Icon | Beat Forte SP in Nebula Hole Area 6(Random Encounter) |
Unlockable - Secret Bosses | |
| Chaos Lord - Nebula Gray V2 | Defeat all 6 DS navis in Nebula Area6 |
| Chaos Lord - Megaman/Rockman DS | Defeat all 6 DS navis with an average time under 25 seconds |
| Chaos Lord - Bass/Forte V3 | Defeat all 6 DS navis with an average time between 25-40 seconds |
| Chaos Lord - Nebula Gray V3 | Defeat all 6 DS navis with an average time over 40 seconds |
| Bass/Forte SP | Defeat Chaos Lord Bass/Forte V3 |
Unlockable - Liberation Mission Prizes | |
| BlizzardManSP B | Beat Mission 1 in 5 or less |
| BlizzardMan B | Beat Mission 1 in 6 - 7 |
| ShadeMan SP S | Beat Mission 2 in 7 or less |
| ShadeMan S | Beat Mission 2 in 8 - 9 |
| CloudMan SP C | Beat Mission 3 in 7 or less |
| CloudMan C | Beat Mission 3 in 8 - 9 |
| Fullcust * | Beat Mission 4 in 8 or less |
| AntiNavi M | Beat Mission 4 in 9 - 10 |
| CosmoMan SP C | Beat Mission 5 in 7 or less |
| CosmoMan C | Beat Mission 5 in 8 - 9 |
| Z Saber Z | Beat Mission 6 in 8 or less |
| ProtoMan B/Colonel C | Beat Mission 6 in 9 - 10 |
| BlakWing W | Beat Mission 7 in 10 or less |
| ShadeMan DS S | Beat Mission 7 in 11 - 12 |
| Muramasa M | Beat Mission 8 in 12 or less |
| CloudMan DS C | Beat Mission 8 in 13 - 14 |
| Anubis A | Beat Mission 9 in 14 or less |
| CosmoMan DS C | Beat Mission 9 in 15 - 16 |
Glitch - Use Medi's Liberation Ability at No Cost | |
| This glitch works in the Japanese version of the game only; it was removed in the European and American versions.First, get into a Liberation Mission and walk Medi up to a panel and select the TwinLiberate ability. Two panels (the one Medi is at and the one at the other end of the row) will be outlined in green. However, select 'No' when Medi asks you to use TwinLiberate.Switch to another Navi (don't do anything else before this!) and take him to the second panel that was outlined in green (not the one Medi was at) and press 'A' on the panel. See how the command changed from 'Liberate' to 'TwinLiberate', and how that panel and one Medi is at are now outlined in green? Select 'TwinLiberate' and if you win, it will function exactly like Medi's ability - without the Order Point cost. | |
Password - Navi Customizer Programs - Compression Codes | |
| To enter these codes, have the desired Navi Customizer Program highlighted in the Navi Customizer screen. Hold the Right (->) button on the D-Pad, then enter the 10 button code (Composed of different combinations of the buttons A, B, L and R) for that NCP to compress it. Once compressed, the Navi Customizer Program's size will be reduced by one block, or square. Only non-textured programs can be compressed (AutoRun cannot be compressed either), and inputting the code again will decompress it. | |
| Compresses BatteryMode | AABRABRLLR |
| Compresses BodyPack | BARABRLRRA |
| Compresses Collect | BRALARBAAB |
| Compresses Custom +1 | AARLBABALB |
| Compresses Dandyism | RRBBRBRBAA |
| Compresses First Barrier | RLABBARALR |
| Compresses FloatShoes | ALLBRLAAAL |
| Compresses HumourSense | ABLARABLRL |
| Compresses MegaFolder 1 | BBABBRRLAR |
| Compresses Millionare | RLRARRLLLR |
| Compresses SelfRecovery | RLRLRBBRAB |
| Compresses Shield | ABARALRBBA |
| Compresses SuperArmour | RABRALLRBA |
| Compresses UnderShirt | ARBBRLRALA |
| compresses bugstopper | BABLABRLRB |
| Compresses GigaFolder1 | RRLBLLARBL |
| Compresses AttackMAX | LLLRRBARBL |
| Compresses ChargeMAX | ALAARBRBAR |
| Compresses BusterPack | LLRARLBLAR |
| Compresses ShinobiDash | RLLALLBABB |
| Compresses KawarimiMagic (AntiDmg) | RBBARBRARB |
| Compresses Custom2 | BARLLRALBR |
| Compresses RapidMAX | RARLLRRABA |
| Compresses SaitoBatch | ALRABLRALR |
| Compresses RushSupport | RBLRBRLLRL |
| Compresses BeatSupport | ABBRAABRBR |
| Compresses TangoSupport | LBLABLABAL |
| Compresses MegaVirus | AABLARBLAA |
| Compresses GigaVirus | BBRALBLARR |
| Compresses AirShoes | BLBABLBBAA |
| Compresses the JungleLand program | LRLABLBBLA |
| Compresses the I'm Fish program | BABALRARAA |
| Compresses the Oil Body program | LBRARLABLB |
| Compresses the Reflect program | LLRBLLAALB |
| Compresses Mega Folder 2 | LABBLBAALL |
Password - Numberman codes | |
| Go to the numberman machine in Higsby's shop when it is placed there and enter the passwords to get your prize. | |
| HP+400 NCP | 45654128 |
| Static S | 48958798 |
| Anti Navi V | 05068930 |
| Full Energy | 90914896 |
| Untrap | 00798216 |
| DjangoSP D | 91098051 |
| Body Pack | 30112002 |
| Dark Invis * | 68799876 |
| Spin Blue | 12541883 |
| Spin Green | 78987728 |
| Spin Red | 30356451 |
| HP+50 NCP | 31084443 |
| Anti Sword R | 10386794 |
| Unlocker | 28706568 |
| Anti Water * | 25465278 |
| Anti Fire * | 73877466 |
| Lock Enemy | 29789661 |
| BeatSupport NCP | 79877132 |
| Full Energy | 12118790 |
| SoulTime +1 (Yellow NCP) | 28256341 |
| Recovery-300 Y | 18746897 |
| Anti Wood * | 10133670 |
| TangoSupport NCP | 54288793 |
| BusterPack NCP | 80246758 |
| Unlocker | 64664560 |
| RushSupport NCP | 09609807 |
| Custom 2 | 15595587 |
| Gun Del Sol 3 O | 35321321 |
| Unlocker | 73978713 |
| Attack MAX (Yellow NCP) | 63231870 |
| HP +200 (Pink NCP) | 90630807 |
| Custom Bolt 3 G | 07765623 |
| Anti Elec * | 35607360 |
| Sneakrun Subchip | 64892292 |
| HP+400 (Pink NCP) | 03419893 |
| HP+300 (White NCP) | 13926561 |
| Rapid MAX (Pink NCP) | 36695497 |
| HP+500 (White NCP) | 72846472 |
| Charge MAX (White NCP) | 87412146 |
| SpeedMAX | 36695497 |
| Steal Revenge P | 68942679 |
| Death Match 3 V | 52052687 |
| Quick Gauge * | 83143652 |
| Anti Heal P | 44213168 |
| Bug Fix * | 50364410 |
| HP+500 (Pink) NCP | 50906652 |
| Mega Folder 2 NCP | 97513648 |
| HP+300 (Pink) NCP | 48785625 |
Password - NeoVarSwrd | |
| If you hold down 'A' and put in a button sequence fast, you will get a wider range for NeoVarSwrd. | |
| CrossSwrd slash | Down, Right, Up |
| Double LifeSwrd slash | Up, B, Down, B, Up, B |
| SuperSonicBoom slash | Left, Right, Left, B |
Password - VarSwrd | |
| To use these, you must hold down the 'A' button and quickly put in the sequence. These only work with VarSwrd. | |
| FghtSwrd slash | Left, Left-Down, Down, Right-Down, Right |
| LifeSwrd slash | Down, Left, Up, Right, Down |
| LongSwrd slash | Down, Right-Down, Right |
| SonicBoom slash | Left, B, Right, B |
| WideSwrd slash | Up, Right, Down |
Password - Z-Saber | |
| To use this, you must hold the A button while using Z-Saber, and input the following code on the third slash. You must be holding A while it is slashing, and the code must be inputted on the third slash. | |
| Sonicboom after the third slash. | B, Back |
Password - Gyroman | |
| Input this code as soon as you use the Gyroman Chip. Hold the buttons down. | |
| If the enemy is on the same row as you, Gyroman bombs it three times instead of bombing the row. | L+R |
Password - Shademan Extra Effects | |
| When you use the Shademan SP/DS chip, as soon as you see Shademan come up, immediately press the following codes for an extra effect to his attack. | |
| Makes enemy paralyzed. | Press Down, Down-Right, Right+A |
| Makes enemy confused. | Press Down, Down-Left, Left+A |
Password - Larkman | |
| As soon as you use the Larkman chip press this sequence, it will make a beep if entered correctly. | |
| Larkman's attack pierces right through auras and barriers. | press up, up/right, right, down/right, down |
Password - SearchMan Chip Extra Effect | |
| Destroy all enemy chips when hit by Searchman | A+B |
Secret - Boktai 2 Crossover Battle Mode | |
| With attaching the Wireless Adapter before the Title Screen appears. Under Continue you will get Crossover Battle Mode.With this mode you can face Shademan and link up Wirelessly to Boktai 2 to see who the fastest is to beat Shademan using the EXE 5 and Boktai 2 System.Requires Two Wireless Adapters. | |
Secret - Unlimited Money | |
| After winning the End Area 5 Liberation Mission, there will be a gold Mr. Prog there who will recreate the battle. Talk to him and start the battle. Send a Navi to liberate the first item square and you should obtain 1800 Zennys. Next, retreat. You will leave the battle, however you will keep the 1800 Zennys. Repeat as many times as you want for more Zennys. | |
